Download the Tutorial Data SetΒΆ
We have prepared a small toy data set for this tutorial. You can download the data set using the following commands:
cd /vol/spool
java -jar ~/bibis3-1.6.0.jar -d --region eu-west-1 s3://mg-tutorial/tutorial-data.tar .
Unzip the tar-ball and change to the data directory:
tar xf tutorial-data.tar
cd tutorial-data
The tutorial-data directory has the following content:
| File | Content |
|---|---|
| genomes/ | Directory containing the reference genomes |
| gold_std/ | Gold Standard assemblies |
| read1.fq | Read 1 of paired reads (FASTQ) |
| read2.fq | Read 2 of paired reads (FASTQ) |
| reads.fas | Shuffled reads (FASTA) |